# how to omitt columns with only nan values when calculating means across mutiple tables?

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Tomaszzz on 16 Mar 2022
Commented: Tomaszzz on 18 Mar 2022
Hi all,
I have a 21x1 cell with 100x 18 tables
I am calcuating mean of:
row 1, column1, all tables
row 2, column1, all tables
....
row 100, column 1, all tables
I repeat for remaining 17 columns, so ultimately, I have a table 100x18.
table=zeros(100,18);
for k=1:18
table_mean=table+table2array(my cell{k});
end
table_mean= table_mean/18
Howewever, some of the columns in a few tables have only 'nan' values. Is there a way to omitt those columns in my calculations?

Voss on 16 Mar 2022
Edited: Voss on 17 Mar 2022
This omits all NaNs from the mean calculation.
n_tables = numel(t_sq_dot_1);
% put all tables' data into a 3D array: 100x18x21
all_data = zeros([size(t_sq_dot_1{1}),n_tables]);
for ii = 1:n_tables
all_data(:,:,ii) = table2array(t_sq_dot_1{ii});
end
% alternate approach, using cellfun() and {:,:} indexing instead of
% a for loop and table2array():
% all_data = cellfun(@(x)x{:,:},t_sq_dot_1,'UniformOutput',false);
% all_data = cat(3,all_data{:});
% take the mean along the 3rd dimension, omitting NaNs
table_mean = mean(all_data,3,'omitnan');
disp(table_mean)
3.2692 -0.1068 0.1464 0.7062 0.4809 -0.3743 2.0286 0.0392 -0.0006 -35.7761 -52.0503 -2.1355 104.9331 -115.2761 21.4521 91.4996 -63.4170 -65.3826 3.1748 -0.0976 0.1587 0.7196 0.4482 -0.3933 2.0285 0.0363 -0.0197 -35.8181 -51.9571 -2.1162 105.0116 -115.1692 21.5113 90.4465 -66.4467 -65.0551 3.0639 -0.0934 0.1688 0.7253 0.4156 -0.4115 2.0091 0.0294 -0.0340 -35.8540 -51.8641 -2.0990 105.0953 -115.0492 21.5671 89.3639 -69.3250 -64.6531 2.9216 -0.0976 0.1762 0.7191 0.3847 -0.4285 1.9559 0.0161 -0.0412 -35.8832 -51.7764 -2.0856 105.1878 -114.9003 21.6147 88.2254 -71.9573 -64.1058 2.7413 -0.1107 0.1815 0.7018 0.3569 -0.4450 1.8654 -0.0026 -0.0414 -35.9080 -51.7029 -2.0770 105.2896 -114.7116 21.6488 87.0266 -74.2891 -63.3745 2.5242 -0.1300 0.1859 0.6781 0.3340 -0.4632 1.7438 -0.0219 -0.0368 -35.9287 -51.6560 -2.0734 105.3982 -114.4770 21.6643 85.7804 -76.2993 -62.4511 2.2775 -0.1503 0.1900 0.6543 0.3198 -0.4851 1.6021 -0.0362 -0.0301 -35.9440 -51.6492 -2.0742 105.5081 -114.1939 21.6566 84.5093 -78.0121 -61.3473 2.0111 -0.1669 0.1949 0.6343 0.3197 -0.5117 1.4510 -0.0426 -0.0236 -35.9527 -51.6945 -2.0782 105.6120 -113.8618 21.6217 83.2380 -79.4918 -60.0837 1.7356 -0.1771 0.2024 0.6194 0.3364 -0.5416 1.2996 -0.0409 -0.0193 -35.9546 -51.8000 -2.0844 105.7019 -113.4806 21.5566 81.9892 -80.8130 -58.6806 1.4603 -0.1821 0.2144 0.6081 0.3674 -0.5726 1.1542 -0.0323 -0.0186 -35.9514 -51.9691 -2.0923 105.7712 -113.0491 21.4591 80.7822 -82.0368 -57.1537 1.1922 -0.1852 0.2325 0.5981 0.4069 -0.6020 1.0172 -0.0184 -0.0232 -35.9454 -52.2015 -2.1019 105.8159 -112.5650 21.3268 79.6326 -83.2024 -55.5129 0.9350 -0.1892 0.2577 0.5863 0.4484 -0.6276 0.8891 -0.0009 -0.0342 -35.9391 -52.4950 -2.1135 105.8349 -112.0246 21.1578 78.5527 -84.3308 -53.7626 0.6888 -0.1943 0.2900 0.5713 0.4858 -0.6496 0.7697 0.0181 -0.0516 -35.9345 -52.8463 -2.1263 105.8294 -111.4245 20.9502 77.5519 -85.4294 -51.9042 0.4515 -0.1991 0.3276 0.5530 0.5139 -0.6699 0.6562 0.0365 -0.0735 -35.9332 -53.2509 -2.1389 105.8013 -110.7622 20.7035 76.6383 -86.4958 -49.9382 0.2220 -0.2015 0.3667 0.5307 0.5314 -0.6897 0.5445 0.0524 -0.0975 -35.9362 -53.7029 -2.1486 105.7513 -110.0366 20.4191 75.8177 -87.5197 -47.8662 0.0007 -0.1993 0.4030 0.5024 0.5409 -0.7074 0.4310 0.0655 -0.1232 -35.9437 -54.1943 -2.1525 105.6792 -109.2484 20.1000 75.0939 -88.4864 -45.6928 -0.2110 -0.1914 0.4309 0.4662 0.5471 -0.7185 0.3143 0.0787 -0.1518 -35.9558 -54.7148 -2.1484 105.5837 -108.4003 19.7503 74.4686 -89.3799 -43.4264 -0.4131 -0.1783 0.4444 0.4218 0.5543 -0.7168 0.1946 0.0962 -0.1819 -35.9715 -55.2547 -2.1359 105.4634 -107.4964 19.3736 73.9416 -90.1876 -41.0799 -0.6065 -0.1632 0.4398 0.3709 0.5631 -0.6970 0.0741 0.1194 -0.2066 -35.9896 -55.8071 -2.1162 105.3178 -106.5424 18.9728 73.5120 -90.9028 -38.6694 -0.7921 -0.1497 0.4173 0.3156 0.5694 -0.6573 -0.0449 0.1442 -0.2167 -36.0088 -56.3692 -2.0914 105.1478 -105.5444 18.5498 73.1787 -91.5252 -36.2141 -0.9706 -0.1394 0.3810 0.2560 0.5650 -0.5969 -0.1627 0.1630 -0.2044 -36.0279 -56.9404 -2.0639 104.9559 -104.5091 18.1074 72.9405 -92.0596 -33.7341 -1.1432 -0.1307 0.3365 0.1898 0.5401 -0.5151 -0.2845 0.1690 -0.1662 -36.0460 -57.5209 -2.0362 104.7463 -103.4439 17.6495 72.7965 -92.5134 -31.2496 -1.3105 -0.1209 0.2884 0.1149 0.4885 -0.4111 -0.4190 0.1593 -0.1045 -36.0629 -58.1095 -2.0102 104.5248 -102.3575 17.1815 72.7452 -92.8964 -28.7796 -1.4702 -0.1085 0.2408 0.0310 0.4122 -0.2860 -0.5704 0.1338 -0.0280 -36.0790 -58.7026 -1.9870 104.2984 -101.2600 16.7104 72.7827 -93.2199 -26.3409 -1.6153 -0.0935 0.1968 -0.0600 0.3199 -0.1465 -0.7337 0.0945 0.0502 -36.0954 -59.2943 -1.9668 104.0751 -100.1621 16.2434 72.9023 -93.4954 -23.9496 -1.7365 -0.0765 0.1577 -0.1530 0.2218 -0.0064 -0.8952 0.0450 0.1153 -36.1138 -59.8795 -1.9496 103.8633 -99.0751 15.7867 73.0949 -93.7336 -21.6210 -1.8243 -0.0576 0.1215 -0.2394 0.1250 0.1189 -1.0393 -0.0085 0.1542 -36.1364 -60.4558 -1.9352 103.6697 -98.0092 15.3451 73.3504 -93.9446 -19.3700 -1.8721 -0.0362 0.0840 -0.3110 0.0322 0.2225 -1.1517 -0.0564 0.1605 -36.1657 -61.0235 -1.9236 103.4961 -96.9731 14.9217 73.6562 -94.1386 -17.2099 -1.8783 -0.0110 0.0414 -0.3634 -0.0571 0.3121 -1.2205 -0.0902 0.1390 -36.2049 -61.5829 -1.9141 103.3384 -95.9735 14.5187 73.9969 -94.3259 -15.1515 -1.8472 0.0197 -0.0074 -0.3971 -0.1460 0.4032 -1.2398 -0.1082 0.1053 -36.2561 -62.1331 -1.9062 103.1896 -95.0169 14.1382 74.3538 -94.5152 -13.2044 -1.7873 0.0563 -0.0627 -0.4160 -0.2365 0.5047 -1.2126 -0.1180 0.0783 -36.3206 -62.6721 -1.8989 103.0437 -94.1102 13.7826 74.7089 -94.7122 -11.3772 -1.7072 0.0968 -0.1236 -0.4247 -0.3277 0.6112 -1.1497 -0.1298 0.0737 -36.3976 -63.1968 -1.8916 102.8986 -93.2612 13.4553 75.0483 -94.9181 -9.6788 -1.6112 0.1378 -0.1886 -0.4268 -0.4173 0.7071 -1.0653 -0.1502 0.0978 -36.4849 -63.7036 -1.8842 102.7565 -92.4777 13.1600 75.3655 -95.1306 -8.1176 -1.4997 0.1759 -0.2556 -0.4241 -0.5056 0.7760 -0.9735 -0.1805 0.1452 -36.5795 -64.1889 -1.8766 102.6219 -91.7659 12.8997 75.6614 -95.3460 -6.7010 -1.3706 0.2077 -0.3235 -0.4171 -0.5967 0.8065 -0.8833 -0.2187 0.1989 -36.6778 -64.6491 -1.8687 102.5005 -91.1304 12.6756 75.9424 -95.5583 -5.4333 -1.2215 0.2297 -0.3910 -0.4053 -0.6929 0.7958 -0.7931 -0.2640 0.2357 -36.7752 -65.0793 -1.8595 102.3968 -90.5728 12.4868 76.2181 -95.7598 -4.3132 -1.0518 0.2391 -0.4543 -0.3852 -0.7896 0.7540 -0.6950 -0.3182 0.2380 -36.8661 -65.4735 -1.8471 102.3129 -90.0929 12.3305 76.4982 -95.9423 -3.3343 -0.8679 0.2362 -0.5078 -0.3523 -0.8745 0.7025 -0.5836 -0.3807 0.2059 -36.9456 -65.8258 -1.8300 102.2484 -89.6883 12.2034 76.7887 -96.0982 -2.4864 -0.6846 0.2244 -0.5461 -0.3062 -0.9339 0.6641 -0.4617 -0.4425 0.1589 -37.0114 -66.1327 -1.8088 102.2018 -89.3552 12.1021 77.0871 -96.2226 -1.7592 -0.5208 0.2089 -0.5659 -0.2519 -0.9582 0.6498 -0.3400 -0.4866 0.1211 -37.0645 -66.3942 -1.7860 102.1735 -89.0890 12.0236 77.3823 -96.3139 -1.1444 -0.3916 0.1942 -0.5674 -0.1979 -0.9435 0.6545 -0.2332 -0.4979 0.1027 -37.1078 -66.6135 -1.7649 102.1659 -88.8845 11.9657 77.6605 -96.3737 -0.6374 -0.3037 0.1829 -0.5548 -0.1517 -0.8905 0.6615 -0.1546 -0.4718 0.0945 -37.1444 -66.7953 -1.7477 102.1812 -88.7368 11.9269 77.9116 -96.4061 -0.2364 -0.2558 0.1755 -0.5355 -0.1170 -0.8040 0.6518 -0.1075 -0.4162 0.0801 -37.1771 -66.9442 -1.7351 102.2181 -88.6405 11.9068 78.1329 -96.4168 0.0610 -0.2414 0.1712 -0.5175 -0.0931 -0.6940 0.6156 -0.0834 -0.3464 0.0502 -37.2071 -67.0636 -1.7264 102.2704 -88.5897 11.9050 78.3258 -96.4121 0.2595 -0.2514 0.1690 -0.5058 -0.0779 -0.5773 0.5581 -0.0703 -0.2770 0.0060 -37.2333 -67.1557 -1.7207 102.3295 -88.5783 11.9212 78.4906 -96.3983 0.3677 -0.2748 0.1677 -0.5011 -0.0700 -0.4749 0.4948 -0.0612 -0.2172 -0.0465 -37.2535 -67.2216 -1.7168 102.3881 -88.6002 11.9543 78.6247 -96.3796 0.3954 -0.3010 0.1678 -0.5018 -0.0675 -0.4047 0.4405 -0.0554 -0.1731 -0.1007 -37.2657 -67.2622 -1.7145 102.4421 -88.6508 12.0024 78.7248 -96.3584 0.3530 -0.3210 0.1712 -0.5063 -0.0685 -0.3741 0.4040 -0.0529 -0.1498 -0.1490 -37.2694 -67.2786 -1.7141 102.4919 -88.7267 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-1.7456 103.1114 -90.1344 12.8264 78.6311 -96.0290 -2.0502 -0.3257 0.2682 -0.5878 -0.1797 -0.7638 0.5477 -0.1408 -0.3152 -0.1211 -37.2104 -66.4597 -1.7371 103.2346 -90.5146 12.9965 78.5208 -95.9154 -2.6908 -0.3989 0.2704 -0.5787 -0.2020 -0.7647 0.5267 -0.2012 -0.3265 -0.0924 -37.1970 -66.2069 -1.7253 103.3554 -90.9516 13.1824 78.3850 -95.7723 -3.4412 -0.5109 0.2708 -0.5573 -0.2289 -0.7498 0.5010 -0.2731 -0.3451 -0.0591 -37.1787 -65.9178 -1.7125 103.4761 -91.4485 13.3825 78.2276 -95.5935 -4.3087 -0.6580 0.2693 -0.5237 -0.2576 -0.7249 0.4765 -0.3578 -0.3695 -0.0354 -37.1552 -65.5930 -1.7010 103.6009 -92.0082 13.5959 78.0539 -95.3692 -5.2978 -0.8252 0.2647 -0.4790 -0.2841 -0.6962 0.4551 -0.4565 -0.3932 -0.0288 -37.1280 -65.2332 -1.6932 103.7330 -92.6324 13.8214 77.8691 -95.0847 -6.4096 -0.9921 0.2534 -0.4253 -0.3062 -0.6681 0.4372 -0.5676 -0.4109 -0.0359 -37.1003 -64.8393 -1.6910 103.8726 -93.3215 14.0587 77.6780 -94.7201 -7.6426 -1.1432 0.2313 -0.3646 -0.3243 -0.6399 0.4229 -0.6872 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0.1253 -0.3158 -0.0039 0.0541 -1.1041 0.0056 -0.1514 -37.1239 -60.6221 -1.9096 105.0763 -100.6185 16.4105 75.9187 -87.2404 -20.9705 -1.5770 -0.1023 0.1750 -0.2725 0.1091 -0.0567 -1.0696 0.1084 -0.1692 -37.1571 -60.0316 -1.9627 105.2431 -101.6431 16.7379 75.6327 -86.1675 -22.9191 -1.4782 -0.1352 0.2134 -0.2120 0.2143 -0.1664 -1.0049 0.1894 -0.1571 -37.1959 -59.4535 -2.0139 105.4081 -102.6673 17.0631 75.3498 -85.2407 -24.9014 -1.3393 -0.1675 0.2403 -0.1407 0.3128 -0.2691 -0.9078 0.2436 -0.1224 -37.2377 -58.8910 -2.0604 105.5664 -103.6859 17.3840 75.0882 -84.4369 -26.9099 -1.1711 -0.1950 0.2582 -0.0634 0.4040 -0.3560 -0.7832 0.2777 -0.0854 -37.2793 -58.3445 -2.1012 105.7134 -104.6935 17.6990 74.8671 -83.6928 -28.9344 -0.9847 -0.2156 0.2715 0.0186 0.4833 -0.4148 -0.6440 0.3012 -0.0595 -37.3178 -57.8130 -2.1364 105.8456 -105.6837 18.0075 74.7003 -82.9311 -30.9622 -0.7894 -0.2297 0.2848 0.1054 0.5461 -0.4375 -0.5027 0.3179 -0.0414 -37.3515 -57.2951 -2.1660 105.9612 -106.6481 18.3095 74.5941 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Tomaszzz on 18 Mar 2022
Many thanks!