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Convert Adjacency list of graph into Adjacency matrix

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POLLY
POLLY il 17 Ott 2018
Risposto: Guillaume il 17 Ott 2018
I am working with Adjacency lists of a graph with 198 vertices and 2472 edges. How can I construct adjacency matrix of graph in Matlab?
Thank you for any help

Risposte (3)

Bruno Luong
Bruno Luong il 17 Ott 2018
use SPARSE or ACCUMARRAY

Steven Lord
Steven Lord il 17 Ott 2018
How is your data stored?
Do you have a matrix or two vectors containing the endpoints of the edges? In this case you can use sparse or accumarray as Bruno suggested.
Do you have a graph or digraph object? Call adjacency on it.
Is your data stored in a different way? If so, describe your storage system and we may be able to offer some guidance.
  1 Commento
POLLY
POLLY il 17 Ott 2018
Modificato: POLLY il 17 Ott 2018
My data is given in this file. We use the popular Metis input/output format. I have attached an example for Metis input

Accedi per commentare.


Guillaume
Guillaume il 17 Ott 2018
One possible way to read your file:
lists = strsplit(fileread('list.txt'), {'\r', '\n'});
if isempty(lists{end}), lists = lists(1:end-1); end
lists = cellfun(@(v) sscanf(v, '%d'), lists, 'UniformOutput', false);
adj = sparse(repelem(1:numel(lists), cellfun('length', lists)), vertcat(lists{:}), 1)
If you want a full matrix:
full(adj)

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