NANSEN
Versione 0.11.0 (25,8 MB) da
Eivind Hennestad
A collection of apps and modules for processing, analysis and visualization of two-photon imaging data.
Cita come
Eivind Hennestad (2025). NANSEN (https://github.com/VervaekeLab/NANSEN/releases/tag/v0.11.0), GitHub. Recuperato .
Compatibilità della release di MATLAB
Creato con
R2023b
Compatibile con R2020b fino a R2024b
Compatibilità della piattaforma
Windows macOS LinuxTag
Community Treasure Hunt
Find the treasures in MATLAB Central and discover how the community can help you!
Start Hunting!Scopri Live Editor
Crea script con codice, output e testo formattato in un unico documento eseguibile.
+nansen
+nansen/+app
+nansen/+app/+setup
+nansen/+app/+tutorial
+nansen/+common
+nansen/+common/+abstract/@Specification
+nansen/+common/+assertion
+nansen/+common/+constant
+nansen/+common/+exception
+nansen/+common/+uiinform/+roimanager
+nansen/+config
+nansen/+config/+abstract
+nansen/+config/+addons
+nansen/+config/+addons/@AddonManager
+nansen/+config/+addons/@AddonManagerApp
+nansen/+config/+addons/@AddonManagerUI
+nansen/+config/+dloc
+nansen/+config/+dloc/+enum
+nansen/+config/+dloc/@DataLocationModel
+nansen/+config/+dloc/@DataLocationModelApp
+nansen/+config/+dloc/@DataLocationModelUI
+nansen/+config/+dloc/@FolderOrganizationUI
+nansen/+config/+dloc/@FolderPathViewer
+nansen/+config/+dloc/@LocalRootPathManager
+nansen/+config/+dloc/@MetadataInitializationUI
+nansen/+config/+mixin
+nansen/+config/+module
+nansen/+config/+module/@ModuleManager
+nansen/+config/+module/@ModuleManagerApp
+nansen/+config/+module/@ModuleManagerUI
+nansen/+config/+project
+nansen/+config/+project/+event
+nansen/+config/+project/@Preferences
+nansen/+config/+project/@Project
+nansen/+config/+project/@ProjectManager
+nansen/+config/+project/@ProjectManagerApp
+nansen/+config/+project/@ProjectManagerUI
+nansen/+config/+varmodel
+nansen/+config/+varmodel/+event
+nansen/+config/+varmodel/+template/+twophoton
+nansen/+dataio
+nansen/+dataio/+dataconvert/+roi
+nansen/+dataio/+dataconverter/+roi
+nansen/+dataio/+dataconverter/+roi/+adapter/@Caiman
+nansen/+dataio/+dataconverter/+roi/+adapter/@Extract
+nansen/+dataio/+dataconverter/+roi/+adapter/@Nansen
+nansen/+dataio/+dataconverter/+roi/+adapter/@Suite2p
+nansen/+dataio/+dataset
+nansen/+dataio/+dialog
+nansen/+dataio/+fileadapter
+nansen/+dataio/+fileadapter/+imagestack
+nansen/+dataio/+fileadapter/+internal
+nansen/+dataio/+fileadapter/+roi
+nansen/+dataio/+fileadapter/+timeseries
+nansen/+dataio/+metadata
+nansen/+dataio/+session
+nansen/+dataio/+session/deprecated
+nansen/+dataio/@DataIoModel
+nansen/+dataio/@DataSet
+nansen/+datatype/+roi
+nansen/+enum
+nansen/+interactive
+nansen/+internal
+nansen/+internal/+dataio/+fileadapter
+nansen/+internal/+plugin
+nansen/+internal/+plugin/+enum
+nansen/+internal/+project/+create
+nansen/+internal/+refactor
+nansen/+internal/+setup
+nansen/+internal/+setup/+java
+nansen/+internal/+system
+nansen/+internal/+templating
+nansen/+internal/+user
+nansen/+internal/+user/@NansenUserSession
+nansen/+internal/+utility
+nansen/+manage
+nansen/+manage/+options
+nansen/+metadata
+nansen/+metadata/+abstract
+nansen/+metadata/+abstract/@MetadataEntity
+nansen/+metadata/+abstract/@TableVariable
+nansen/+metadata/+event
+nansen/+metadata/+mixin
+nansen/+metadata/+tablevar
+nansen/+metadata/+tablevar/+mixin
+nansen/+metadata/+temp
+nansen/+metadata/+type
+nansen/+metadata/+type/+animal
+nansen/+metadata/+utility
+nansen/+metadata/@MetaTable
+nansen/+metadata/@MetaTableCatalog
+nansen/+mixin
+nansen/+module
+nansen/+module/resources/module_folder_template/+nansen/+module/+category/+name
+nansen/+notes
+nansen/+pipeline
+nansen/+pipeline/@PipelineAssignmentModelApp
+nansen/+pipeline/@PipelineAssignmentModelUI
+nansen/+plugin
+nansen/+plugin/+fileadapter
+nansen/+plugin/+fileadapter/+internal
+nansen/+processing
+nansen/+processing/+image
+nansen/+processing/+mixin
+nansen/+processing/+roi
+nansen/+processing/+roi/+fissa
+nansen/+processing/+util
+nansen/+processing/@MotionCorrection
+nansen/+processing/@MotionCorrectionPreview
+nansen/+processing/@RoiSegmentation
+nansen/+processing/@SignalExtractor
+nansen/+session
+nansen/+session/+methods
+nansen/+session/+methods/+template
+nansen/+tools/+image/+registration
+nansen/+tools/+image/+resize
+nansen/+tools/+image/+transform
+nansen/+twophoton/+autosegmentation
+nansen/+twophoton/+autosegmentation/+able
+nansen/+twophoton/+autosegmentation/+cnmf
+nansen/+twophoton/+autosegmentation/+extract
+nansen/+twophoton/+autosegmentation/+extract/@Options
+nansen/+twophoton/+autosegmentation/+suite2p
+nansen/+twophoton/+autosegmentation/+suite2p/@Options
+nansen/+twophoton/+autosegmentation/+template
+nansen/+twophoton/+roi
+nansen/+twophoton/+roi/+compute
+nansen/+twophoton/+roi/+stats
+nansen/+twophoton/+roimasks
+nansen/+twophoton/+roisignals
+nansen/+twophoton/+roisignals/+analyze
+nansen/+twophoton/+roisignals/+extract
+nansen/+twophoton/+roisignals/+process/+deconvolve
+nansen/+twophoton/+roisignals/+process/+dff
+nansen/+ui
+nansen/+ui/+control
+nansen/+ui/+data
+nansen/+ui/+dialog
+nansen/+ui/+fileviewer
+nansen/+ui/+mixin
+nansen/+ui/+widget
+nansen/+util
+nansen/+util/+path
+nansen/+util/+text
algorithms
algorithms/+flufinder
algorithms/+flufinder/+binarize
algorithms/+flufinder/+convert
algorithms/+flufinder/+detect
algorithms/+flufinder/+filter
algorithms/+flufinder/+longitudinal
algorithms/+flufinder/+module
algorithms/+flufinder/+preprocess
algorithms/+flufinder/+signals
algorithms/+flufinder/+utility
algorithms/+ophys/+twophoton
algorithms/+ophys/+twophoton/+analysis
algorithms/+ophys/+twophoton/+data
algorithms/+ophys/+twophoton/+plotting
algorithms/+stack
algorithms/+stack/+downsample
algorithms/+stack/+process/+compute
algorithms/+stack/+process/+filter2
algorithms/+stack/+process/+filter3
algorithms/+stack/+process/+framebin
algorithms/+stack/+reshape
algorithms/+stack/+transform
algorithms/+stack/+zproject
api/+nansen
apps
apps/+fovmanager
apps/+fovmanager/+fileio
apps/+fovmanager/+mapobject
apps/+fovmanager/+utility
apps/+fovmanager/+utility/+atlas
apps/+fovmanager/+view
apps/+fovmanager/+widget
apps/+fovmanager/@App
apps/+imviewer/+export
apps/+imviewer/+plot
apps/+imviewer/+plugin/@FlowRegistration
apps/+imviewer/+plugin/@NoRMCorre
apps/+imviewer/+plugin/@RoiClassifier
apps/+imviewer/+plugin/@RoiManager
apps/+imviewer/+plugin/@RoiSignalVideo
apps/+imviewer/+tool
apps/+imviewer/+utility
apps/+imviewer/+widget
apps/+imviewer/@App
apps/+imviewer/@ImviewerPlugin
apps/+mclassifier
apps/+nansen
apps/+nansen/+enum
apps/+nansen/@App
apps/+nansen/@FileViewer
apps/+nansen/@MessageDisplay
apps/+nansen/@MetaTableViewer
apps/+nansen/@Preferences
apps/+nansen/@TaskProcessor
apps/+nansen/internal
apps/+roiclassifier
apps/+roiclassifier/@App
apps/+roisignalviewer/@App
apps/+signalviewer
apps/+signalviewer/+event
apps/+signalviewer/+plot
apps/+signalviewer/+pointerTool
apps/+signalviewer/+utility
apps/+signalviewer/@App
apps/+structeditor
apps/+structeditor/+eventdata
dashboards
dashboards/+roimanager
datatypes
datatypes/+nansen/+roisignals
datatypes/+nansen/+stack
datatypes/+nansen/+stack/+data
datatypes/+nansen/+stack/+data/+abstract
datatypes/+nansen/+stack/+metadata
datatypes/+nansen/+stack/+processor
datatypes/+nansen/+stack/+utility
datatypes/+nansen/+stack/+virtual
datatypes/+nansen/+stack/@Deinterleaver
datatypes/+nansen/+stack/@HighResolutionImage
datatypes/+nansen/+stack/@ImageStack
examples
external
external/fileexchange
external/fileexchange/+nansen/+external/+fex/+datautil
external/fileexchange/+nansen/+external/+fex/+sysutil
external/fileexchange/colormaps
external/fileexchange/colormaps/cbrewer/cbrewer
external/fileexchange/colormaps/matplotlib/colormaps
external/fileexchange/other
external/fileexchange/other/GetGoogleSpreadsheet
general
general/+tools
general/+utility
general/+utility/+cell
general/+utility/+class
general/+utility/+data
general/+utility/+data/+mixin
general/+utility/+dir
general/+utility/+io
general/+utility/+path
general/+utility/+string
general/+utility/+struct
general/+utility/+system
graphics
graphics/+applify
graphics/+applify/+menu
graphics/+applify/+mixin
graphics/+applify/+utility
graphics/+applify/+utility/+abstract
graphics/+applify/@uicontrolSchemer
graphics/+nansen/+theme
graphics/+uics
graphics/+uim
graphics/+uim/+abstract
graphics/+uim/+control
graphics/+uim/+decorator
graphics/+uim/+dialog
graphics/+uim/+event
graphics/+uim/+graphics
graphics/+uim/+illustration
graphics/+uim/+interface
graphics/+uim/+interface/+pointerTool
graphics/+uim/+interface/+pointerTool/+mixin
graphics/+uim/+mixin
graphics/+uim/+shape
graphics/+uim/+style
graphics/+uim/+utility
graphics/+uim/+utility/+layout
graphics/+uim/+widget
graphics/+uiw/+abstract
graphics/+uiw/+utility
graphics/+uiw/+widget
modules
modules/+nansen/+module/+general/+core/+fileadapter
modules/+nansen/+module/+general/+core/+fileadapter/+ExcelFile
modules/+nansen/+module/+general/+core/+fileadapter/+MatFile
modules/+nansen/+module/+general/+core/+sessionmethod/+data
modules/+nansen/+module/+general/+core/+sessionmethod/+data/+organize
modules/+nansen/+module/+general/+core/+tablevariable/+session
modules/+nansen/+module/+general/+core/+tablevariable/+session/deprecated
modules/+nansen/+module/+general/+core/+tablevariable/+subject
modules/+nansen/+module/+ophys/+macroscope
modules/+nansen/+module/+ophys/+macroscope/+fileadapter
modules/+nansen/+module/+ophys/+twophoton/+fileadapter
modules/+nansen/+module/+ophys/+twophoton/+sessionmethod/+data/+open
modules/+nansen/+module/+ophys/+twophoton/+sessionmethod/+data/+view
modules/+nansen/+module/+ophys/+twophoton/+sessionmethod/+plot
modules/+nansen/+module/+ophys/+twophoton/+sessionmethod/+process/+autoSegmentation
modules/+nansen/+module/+ophys/+twophoton/+sessionmethod/+process/+deconvolution
modules/+nansen/+module/+ophys/+twophoton/+sessionmethod/+process/+imageProcessing
modules/+nansen/+module/+ophys/+twophoton/+sessionmethod/+process/+motionCorrection
modules/+nansen/+module/+ophys/+twophoton/+sessionmethod/+process/+roiCuration
modules/+nansen/+module/+ophys/+twophoton/+sessionmethod/+process/+roiRegistration
modules/+nansen/+module/+ophys/+twophoton/+sessionmethod/+process/+signalExtraction
modules/+nansen/+module/+ophys/+twophoton/+utility
modules/+nansen/+module/+ophys/+twophoton/+utility/+mscan
modules/+nansen/+module/+ophys/+twophoton/+utility/+prairieview
modules/+nansen/+module/+ophys/+twophoton/+utility/+scanimage
modules/+nansen/+module/+ophys/+twophoton/+utility/+sciscan
modules/+nansen/+module/+ophys/+twophoton/+utility/+thorlabs
shortcuts
shortcuts/+nansen
tools
tools/+roimanager
tools/+roimanager/+autosegment
tools/+roimanager/+binarize
tools/+roimanager/+enum
tools/+roimanager/+eventdata
tools/+roimanager/+fileio
tools/+roimanager/+imtools
tools/+roimanager/+pointerTool
tools/+roimanager/+roitools
tools/+roimanager/+utilities
tools/+roimanager/resources/icons
tools/+timetable
wrappers
wrappers/+nansen/+plugin/+imviewer
wrappers/+nansen/+plugin/+signalviewer
wrappers/+nansen/+toolbox
wrappers/+nansen/+wrapper/+abstract
wrappers/+nansen/+wrapper/+extract
wrappers/+nansen/+wrapper/+extract/+util
wrappers/+nansen/+wrapper/+extract/@Options
wrappers/+nansen/+wrapper/+extract/@Processor
wrappers/+nansen/+wrapper/+extract/@ProcessorT
wrappers/+nansen/+wrapper/+flowreg
wrappers/+nansen/+wrapper/+flowreg/+presets
wrappers/+nansen/+wrapper/+flowreg/+utility
wrappers/+nansen/+wrapper/+flowreg/@Options
wrappers/+nansen/+wrapper/+flowreg/@Processor
wrappers/+nansen/+wrapper/+normcorre/+presets
wrappers/+nansen/+wrapper/+normcorre/+utility
wrappers/+nansen/+wrapper/+normcorre/@Options
wrappers/+nansen/+wrapper/+normcorre/@Processor
wrappers/+nansen/+wrapper/+quicky/+presets
wrappers/+nansen/+wrapper/+quicky/+utility
wrappers/+nansen/+wrapper/+quicky/@Options
wrappers/+nansen/+wrapper/+quicky/@Processor
wrappers/+nansen/+wrapper/+suite2p
wrappers/+nansen/+wrapper/+suite2p/+utility
wrappers/+nansen/+wrapper/+suite2p/@Options
wrappers/+nansen/+wrapper/+suite2p/@Processor
| Versione | Pubblicato | Note della release | |
|---|---|---|---|
| 0.11.0 |
|
Per visualizzare o segnalare problemi su questo componente aggiuntivo di GitHub, visita GitHub Repository.
Per visualizzare o segnalare problemi su questo componente aggiuntivo di GitHub, visita GitHub Repository.
