MyFisher24

Versione 2.0.0.0 (14,2 KB) da Giuseppe Cardillo
A very compact routine to compute Fisher's exact test on a 2x4 matrix
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2,7K download
Aggiornato 6 apr 2018
Visualizza la licenza su GitHub

Fisher's exact test of 2x4 contingency tables permits calculation of precise probabilities in situation where, as a consequence of small cell frequencies, the much more rapid normal approximation and chi-square calculations are liable to be inaccurate. The Fisher's exact test involves the computations of several factorials to obtain the probability of the observed and each of the more extreme tables. Factorials growth quickly, so it's necessary use logarithms of factorials. This computations is very easy in Matlab because x!=gamma(x+1) and log(x!)=gammaln(x+1). This function is now fully vectorized to speed up the computation. Actually, the function also computes the mid-P correction to make the test less conservative.

Cita come

Giuseppe Cardillo (2024). MyFisher24 (https://github.com/dnafinder/myfisher24), GitHub. Recuperato .

Compatibilità della release di MATLAB
Creato con R2014b
Compatibile con qualsiasi release
Compatibilità della piattaforma
Windows macOS Linux

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Le versioni che utilizzano il ramo predefinito di GitHub non possono essere scaricate

Versione Pubblicato Note della release
2.0.0.0

inputparser; table implementation; github link
1.5.0.0

Changes in description
1.4.0.0

Actually, the function also computes the mid-P correction to make the test less conservative.
1.3.0.0

Bug fixed after Jon comment
1.2.0.0

little improvements in tables enumeration
1.1.0.0

Changes in help section
1.0.0.0

Speeding up using gammaln function and vectorization
Per visualizzare o segnalare problemi su questo componente aggiuntivo di GitHub, visita GitHub Repository.
Per visualizzare o segnalare problemi su questo componente aggiuntivo di GitHub, visita GitHub Repository.