SYSMOLE

Versione 1.0 (11,9 MB) da Miguel Fribourg
SYMOLE is a hybrid computational-analytical tool to obtain molecular kinetic schemes
0.0
(0)
65 download
Aggiornato 15 feb 2017

Visualizza la licenza

SYSMOLE is a hybrid computational-analytical tool that derives a molecular kinetic scheme from stimulus-response cellular macroscopic traces. SYSMOLE utilizes system-identification input-output analysis to obtain a transfer function between the stimulus and the overall cellular response in the Laplace-transformed domain. It then derives a Markov-chain state molecular kinetic scheme uniquely associated with the transfer function by means of a classification procedure and an analytical step that imposes general biological constraints.
A description of the tool, its robustness to noise, and examples of its application to experimental traces can be found in "Elucidation of Molecular Kinetic Schemes from Macroscopic Traces using System Identification" Fribourg M., Logothetis D. E., González-Maeso J., Sealfon S. C., Galocha-Iragüen B., Las Heras Andrés F., and Brezina V. PloS Computational Biology, 2017. http://dx.doi.org/10.1371/journal.pcbi.1005376

Cita come

Miguel Fribourg (2025). SYSMOLE (https://it.mathworks.com/matlabcentral/fileexchange/61465-sysmole), MATLAB Central File Exchange. Recuperato .

Compatibilità della release di MATLAB
Creato con R2016a
Compatibile con qualsiasi release
Compatibilità della piattaforma
Windows macOS Linux
Categorie
Scopri di più su Chemistry in Help Center e MATLAB Answers
Tag Aggiungi tag

Community Treasure Hunt

Find the treasures in MATLAB Central and discover how the community can help you!

Start Hunting!

PCOMPBIOL-D-16-01297R1 Scripts/

SysMOLE Toolbox/

Versione Pubblicato Note della release
1.0

Link to publication updated
Renamed some files.

Experimental data included
Figure update