Error - xml file conversion into stochiometric matrix using sbmlimport function

1 visualizzazione (ultimi 30 giorni)
Hello,
I am using sbmlimport function to convert KEGG pathway SBML (KGML) file into stochiometric matrix. It has .xml extension, but getting this error -- Error using SimBiology.SBMLReadWrite/sbmlread. A fatal error occurred reading in this file. Error in privatesbmlio (line 26). Error in sbmlimport (line 62) ret = privatesbmlio('read',nargout,{fullfilename, varargin});
1. I am using Matlab 2014a. 2. example, m = sbmlimport('lotka.xml'); [M,objSpecies,objReactions] = getstoichmatrix(m1); is working but not for my Kegg Pathway. 3. I downloaded a kegg pathway-http://www.genome.jp/kegg-bin/show_pathway?map=hsa05230&show_description=show. Code is m = sbmlimport('hsa.xml') but it is giving error.

Risposte (0)

Community

Più risposte nel  SimBiology Community

Categorie

Scopri di più su Perform Sensitivity Analysis in Help Center e File Exchange

Prodotti

Community Treasure Hunt

Find the treasures in MATLAB Central and discover how the community can help you!

Start Hunting!

Translated by