fminsearch for ligistic fit

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Mona Berg
Mona Berg il 28 Mag 2020
Commentato: Mona Berg il 2 Giu 2020
I'm trying to use fminsearch to fit a logistic model to my data. My problem is that I'm rreally confused about how to define the input for the fminsearch function.
My data:
x = [0.5 2.7 6 8.8 9.7 12.8 16 20 23];
y = [0.8 1.1 3.4 7 9 13 13.4 13.2 18.8];
I want to fit the parameters of following function to my data:
Now I don't know how to define the right functions for the optimization.
What I've tried so far:
f = @(p,x)p(1)*(0.5-(1./(1+exp(p(2)*(x-p(3))))))+p(4)*x+p(5);
f2 = @(p)f(p,x);
p0 = [0.1 0.1 0.1 0.0001 0.1];
p = fminsearch(f2,p0);
But this is not the right way.

Risposta accettata

Walter Roberson
Walter Roberson il 28 Mag 2020
f2 = @(p)f(p,x);
That relies on x existing in your workspace. If you are going to do that you might as well assume it on the previous line, and use cleaner code.
But your bigger problem is that you are failing to calculate a sum-of-squared errors
f = @(p) p(1) * (0.5 - (1 ./ (1 + exp(p(2)*(x-p(3)))))) + p(4) .* x + p(5);
f2 = @(p) sum((f(p) - y).^2);
p0 = [0.1 0.1 0.1 0.0001 0.1];
p = fminsearch(f2, p0);
  1 Commento
Mona Berg
Mona Berg il 2 Giu 2020
With defining ma data above, I assumed the data to be in my workspace.
But I missed the sse computation, thanks!

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