Version 4.7, part of Release 2016b, includes the following enhancements:

  • Next Generation Sequencing: Preprocess NGS data with seqfilter, seqtrim, seqsplit, and seqsplitpe​ functions

See the Release Notes for details.

Version 4.6, part of Release 2016a, includes the following enhancements:

  • featureCount: Summarize sequence reads for large NGS datasets

See the Release Notes for details.

Version 4.5.2, part of Release 2015b, includes bug fixes.

See the Release Notes for details.

Version 4.5.1, part of Release 2015a, includes bug fixes.

See the Release Notes for details.

Version 4.5, part of Release 2014b, includes the following enhancements:

  • Small sample unpaired hypothesis tests for count data
  • Functions for navigating the Gene Transfer Format (GTF) hierarchy to assist with alternative gene splicing and isoform analyses
  • Attractor metagene algorithm for feature engineering using mutual information-based clustering

See the Release Notes for details.