Why my binary mask show only 0 value?

Here's my codes:

fontSize = 16;
I=imread('cropa8.png');
subplot(1, 2, 1);
imshow(I, []);
axis('on', 'image');
drawnow;
hp = impixelinfo();
hFig1 = gcf;
hFig1.Units = 'Normalized';
hFig1.WindowState = 'maximized';
hFig1.Name = 'Demo by Image Analyst';
hsvImage = rgb2hsv(I);
mask = hsvImage(:,:,2) > 0.3;

mask = imfill(mask, 'holes');
subplot(1, 2, 2);
imshow(mask, []);
axis('on', 'image');
drawnow;
hp = impixelinfo();
subplot(1, 2, 1);
boundaries = bwboundaries(mask);
numberOfBoundaries = size(boundaries, 1); 
hold on;
for k = 1 : numberOfBoundaries
    thisBoundary = boundaries{k}; 
    x = thisBoundary(:,2); 
    y = thisBoundary(:,1);
    plot(x, y, 'g-', 'LineWidth', 3); 
    imwrite(logical(mask),'maska8.png');
end
hold off;
axis('on', 'image');

As below shown is my result value in logical mask only shown 0 value.

And this my data image, which is 512x512x3 uint8.

Can someone help me, why my image after convert into binary mask only shown in 0 value?

Answer 1

[dpb]

fontSize = 16;
I=imread('cropa8.png');
subplot(1, 2, 1);
imshow(I, []);
axis('on', 'image');
drawnow;
hp = impixelinfo();
hFig1 = gcf;
hFig1.Units = 'Normalized';
hFig1.WindowState = 'maximized';
hFig1.Name = 'Demo by Image Analyst';
hsvImage = rgb2hsv(I);
mask = hsvImage(:,:,2) > 0.3;
any(mask,'all')

ans = logical
   1

mask = imfill(mask, 'holes');
any(mask,'all')

ans = logical
   1

subplot(1, 2, 2);
imshow(mask, []);
axis('on', 'image');
drawnow;
hp = impixelinfo();
subplot(1, 2, 1);
boundaries = bwboundaries(mask);
numberOfBoundaries = size(boundaries, 1);

hold on;
for k = 1 : numberOfBoundaries
    thisBoundary = boundaries{k}; 
    x = thisBoundary(:,2); 
    y = thisBoundary(:,1);
    plot(x, y, 'g-', 'LineWidth', 3); 
    imwrite(logical(mask),'maska8.png');
end
nnz(mask)

ans = 8968

r1=find(any(mask,2),1), r2=find(any(mask,2),1,'last')

r1 = 21

r2 = 159

c1=find(any(mask),1), c2=find(any(mask),1,'last')

c1 = 277

c2 = 365

mask(min(r1-5,r2+5):max(r1-5,r2+5),min(c1,c2)-5:max(c1,c2)+5)

ans = 149×99 logical array
  Columns 1 through 49

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  Columns 50 through 98

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   0   0   0   0   0   0   0   1   1   1   1   1   1   1   1   1   1   1   1   1   1   1   1   1   1   1   1   1   1   1   1   1   1   1   1   1   1   1   0   0   0   0   0   0   0   0   0   0   0
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hold off;
axis('on', 'image');

M=mask(min(r1,r2):max(r1,r2),min(c1,c2):max(c1,c2));
whos M

  Name        Size            Bytes  Class      Attributes

  M         139x89            12371  logical              

figure,imshow(ans,[])

You're just not looking in the right place...

[Dayangku Nur Faizah Pengiran Mohamad]

Hello Sir. Back into this post question. What do you mean by "not looking in the right place"?

Is the last result you get the size of image is 512x512 pixels? Because I need the image size of 512x512 px after all the processing done.

Many thanks.

[dpb]

By the initial post you were just looking at a section of the logical array that was all zero...as the code I posted shows, the whole array is NOT 0 but the map of the selected area just as you think it should have been -- the two first images are both 512 square, yes, you can observe the area in white on the black background that matches the same area on the original at left.

The second section of code simply locates where the first/last rows/columns are in the mask and then displays that area only (with a band of 5 additional pixels around it for better visualization).

[Dayangku Nur Faizah Pengiran Mohamad]

Ok Sir, I get now thanks and one more question. I have saved the last image result that you obtained. Is it the image sizes is 577x433 px? How can I get the exact area like this but with in 512x512 px without losing information quality of the image?

[dpb]

Why don't you use size() on the result and see intead of guessing?

But, no, it certainly isn't that; don't know how you came up with those values at all...see the little addition to the previous answer at the bottom that looks like

%M=mask(min(r1,r2):max(r1,r2),min(c1,c2):max(c1,c2));
%whos M
%Name        Size            Bytes  Class      Attributes 
%M         139x89            12371  logical              

shows that the bounds of the mask area is a subsection of the total image that is 139x89; the plotted version is 10 larger in each direction since I added a 5-pixel border.

The original image is 512x512 and you've only taken a very small piece of it; it can't possibly be 512x512 and you have all the information there is; if you mean to blow the mask itself up to 512x512, you'll have to scale it up by

512./[139 89]

ans = 1×2

3.6835 5.7528

which is quite a large magnification and it's going to get really jaggedy around the edges as it already is somewhat that way.

I'm not an image processing guy; there are undoubtedly ways to try to do such magnifications with smoothing, but those techniques are beyond my ken, sorry.