Changing orientation of 3D medical PET MRI images

Hello everyone,

I am MSc student and recently started working on image processing. I have following issue that I cannot overcome.

I have 89 PET MRI slices, taken from my phantom, and when I read them to MATLAB, using dicomread, I obtain sagittal view. But I need them into coronal view. Is there any solution for that in MATLAB.

or I should re-orient my phantom and re-take my images?

Also I tried medicalVolume functions but I could not find any solution for converting slices into coronal plane?

Answer 1

[DGM]

What's wrong with just using shiftdim(), permute(), flip(), rot90() as needed?